CDS

Accession Number TCMCG017C29252
gbkey CDS
Protein Id OMO64708.1
Location complement(join(23896..24159,24470..25059,26104..27952))
GeneID InterPro:IPR000569
Organism Corchorus olitorius
locus_tag COLO4_31893

Protein

Length 900aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01020882.1
Definition E3 ubiquitin-protein ligase [Corchorus olitorius]
Locus_tag COLO4_31893

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K10591        [VIEW IN KEGG]
EC 2.3.2.26        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04011        [VIEW IN KEGG]
ko04120        [VIEW IN KEGG]
ko04144        [VIEW IN KEGG]
ko04530        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map04011        [VIEW IN KEGG]
map04120        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
map04530        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000302        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007568        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009636        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010150        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0042542        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046677        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090693        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTCTCTACCAATCCCCCGCCGTTGATCAATTCAACAACGGCTACGATCACCGTCTTTCCTCCAAGCGCAAGTTCGACGATTATGCCCATGCTTTTGATGATGATGACGACGATGACGCCGCGCCCCTAGTCCCAGTCAGAATGCGAAAAGACGACCTCCACCCCCACCTCCACCATCAAGGCAGCCACCCAATCTCAGCTGCTCACCCCTCATCCAAAGGCCACTCTTCCTCCTCCCCTTCCTCTGCCCTCGATTCCCGCCCTTCCTCCTGCGATGCCCCCTCATCATCCGCCACGTGTTCCTCCTCTCGGCTCCAATTTTTCATCCGAATGCTCTCCGAGGGCAAAACCATGGTGGTCCATGCCAATTCCGAGGACACCGTCAAATCCCTCCACGAGAGGCTTCAGCTTATGACCGGAATTCCAGTGATCGAGCAACGCCTAATTTATCGCGGGAAGCAGCTCCAGTGGGAGCAATCCCTAGCTGATTGTGCCATACAAAACGACGCCGGACTTCAACTCGTCGGCCGTATGCGATCCACAGACCACCCTCAGACCTGGCAGGTCATGGACGACATGATCTCCGTCGTTTGCCGCCTTTGTCGAGGCGAATTAGTCTCTTCCTCAACCAAGCGTATCAGAGATTGTTTGAACAAGTTCTTCACCATGACTGCAAAGGACAATGGCGACTCTGCCCCGGCTCACTTGCAGATATTTATGTCATCTTCGGCTCCTGCAGCTTTGGTAATGCTTTATATGTCTCCAATTATCGGCAATAAGGAGTGTGCTGAAATTTCAATTAAACATTTTCTAAATTCGTGTAAGAATGTTGTATCAAAGCAGTTTCATTCTTACTGTGCACCAATAGTGTTAGAGTTTTGCAAGTTGCTTAGAAAGGTTGTTAAAGATGATGCTTTGTATGTGCAAAGCCGGAGTACACTAGGATTCTTGTTGGAAATTGTTGGCAGTTCCAAAAGTTTAGTGATGCAAGAGGTTAAAGGGGCTATTGTTGTGGAAGATATCTTCCCCTTTGTCAATGAGTTGGCTGATAAGTTATCTAAGGATTTGGATTCTAGTGTAGAATCTACCACTAGTAGTGGACCATTATTGAGTGATGTCAGGGATTTCACAGCATTCTTGAACCCCCTGCGCTTTGCCATTCGGGAGCAAGTGGGGTTTCAAACCCCGATATCAGTTGACTGGCGTAAGAAGGACTACAACCATCCGCCCTATGGGGAGGAGATTGAGTTTCTTCATGGTTTATTCGATGATTTGTTGGCTAAAATGGAAAAATGCCTCATGAGAATGGAGGAAAGCCTAGCTGCAAGGGAACCCAGCGAAGGTGACTTTGTTCTTCCGGGGTGGTCTCAGTATCTTGCTATTTTGAAGGAATTGAATAACATCTCAAAACTTTATCAGGGTTCTGAAGAGCAATTTTGGATGGTTTTGAGGAATAGAAAGCGTTCAATATGTGCGCTGGTTATTAGATTTGCAAAGAGAACTGATGATAATAGGTGGCTACTTGAGCATAAGGATGTCTCTGATTTTGAATCCAGGAGGCATTTAGCCATGATGATGTTTCCTGAGGTAAAAGAAGATTATGAGGAATTGCATGAGATGCTCATTGACAGGTCTCAGTTATTGGCAGAGTCATTTGAATACATTGCTCGTGCAGAGCCTGAATCACTACATGCTGGTCTGTTTATGGAATTTAAAAATGAAGAAGCTACAGGCCCTGGTGTACTGAGGGAGTGGTTTTTCTTGGTATGCCAAGCTATATTCAACCCCGAGAATGCCCTTTTTGTGCCTTGTGCAAATGACCGTAGAAGATTTTTTCCTAACCCTGCATCTAGGGTGGATCCTTTACACCTCGATTACTTCAGTTTTGCTGGCCGTGTGATTGCATTAGCATTGATGCATAAAGTGCAAGTTGGTGTTGTCTTTGATCGTGTGTTTTTCTTACAATTGGCTGGAATGCATATAACTTTGGAAGATATTCGAGAGGCAGATCCATGCTTGTATAGCAGCTGCAAGAAGATTTTGGAAATGGATGCTGAGTTTATCGATTCAGATGCTTTAGGACTGACTTTTGTTAGAGAAGTTGAGGAGTTAGGATCCAGGAAAGTTGTGGAGCTCTGCCCTGGTGGGAAAGCCATTGTTGTAAATAGCAAGAATAGGCAACAATATGTTAACCTTCTTATCGAGGATCGCTTTGTAACATCTATTTCTGAACAGGTAAAGTATTTTGGCCAAGGTTTCAGCCATATTCTTTCTAATTCGAGGCTCCAAAAGTTCTTTTTCCGAAGTTTAGAGCTTGAGGACCTTGATTGGATGCTTTATGGAAGCGAAAGTCCCATCTGTGTTGAAGACTGGAAGGCACATACTGAGTACAATGGCTACAGAGAAACTGATCCTCAAATAACCTGGTTCTGGCAGATAGTTCGGGAAATGTCAGCAGAGCAGAGAAAGGTGCTTCTTTTCTTCTGGACCTCGGTGAAGTATCTTCCAGTGGAAGGTTTTCGTGGTTTAGCCTCCCGGCTATACATTTACAAGTCCTCGGAGCCCCATGTGCGTCTTCCATCATCTCATACATGCTTTTACCGATTGTGTTTCCCACCATATCCCTCCATGGCAGAAATGCAAAAACGTCTTAGAGTTATTACTCAGGAACATGTTGGATGCAGCTTTGGCACCTGGTAA
Protein:  
MSLYQSPAVDQFNNGYDHRLSSKRKFDDYAHAFDDDDDDDAAPLVPVRMRKDDLHPHLHHQGSHPISAAHPSSKGHSSSSPSSALDSRPSSCDAPSSSATCSSSRLQFFIRMLSEGKTMVVHANSEDTVKSLHERLQLMTGIPVIEQRLIYRGKQLQWEQSLADCAIQNDAGLQLVGRMRSTDHPQTWQVMDDMISVVCRLCRGELVSSSTKRIRDCLNKFFTMTAKDNGDSAPAHLQIFMSSSAPAALVMLYMSPIIGNKECAEISIKHFLNSCKNVVSKQFHSYCAPIVLEFCKLLRKVVKDDALYVQSRSTLGFLLEIVGSSKSLVMQEVKGAIVVEDIFPFVNELADKLSKDLDSSVESTTSSGPLLSDVRDFTAFLNPLRFAIREQVGFQTPISVDWRKKDYNHPPYGEEIEFLHGLFDDLLAKMEKCLMRMEESLAAREPSEGDFVLPGWSQYLAILKELNNISKLYQGSEEQFWMVLRNRKRSICALVIRFAKRTDDNRWLLEHKDVSDFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLAESFEYIARAEPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCANDRRRFFPNPASRVDPLHLDYFSFAGRVIALALMHKVQVGVVFDRVFFLQLAGMHITLEDIREADPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRKVVELCPGGKAIVVNSKNRQQYVNLLIEDRFVTSISEQVKYFGQGFSHILSNSRLQKFFFRSLELEDLDWMLYGSESPICVEDWKAHTEYNGYRETDPQITWFWQIVREMSAEQRKVLLFFWTSVKYLPVEGFRGLASRLYIYKSSEPHVRLPSSHTCFYRLCFPPYPSMAEMQKRLRVITQEHVGCSFGTW